STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1812ABC transporter ATP-binding protein. (255 aa)    
Predicted Functional Partners:
ebA1813
ABC transporter, permease protein.
 
 
 0.998
ebA1814
ABC transporter, periplasmic binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.992
ebA1809
Ferric uptake regulator; Belongs to the Fur family.
  
  
 0.887
ebA1811
Hypothetical protein.
       0.773
fur
Ferric uptake regulation protein (Ferric uptake regulator); Belongs to the Fur family.
  
  
 0.548
ebA5688
Hypothetical protein.
  
  
 0.524
ebA1803
Putative LuxR-family transcriptional regulator.
     
 0.470
ebA1805
HlyD family secretion protein.
       0.456
ebA1807
ABC transporter, ATP-binding/permease.
      
0.456
ebB52
Hypothetical protein.
       0.456
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.