Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ebA1839Hypothetical protein, possibly TonB-like energy transducer. (230 aa)    
Predicted Functional Partners:
exbD1
Biopolymer transport protein ExbD/TolR.
 
 
 0.966
exbB
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.963
ebA6096
Predicted TonB-dependent receptor protein.
  
 
 0.863
exbD2
Biopolymer transport protein ExbD/TolR.
 
 
 0.832
tolR
Biopolymer transport protein ExbD/TolR.
  
 
 0.819
hemR
Hemin receptor precursor, TonB-dependent outer membrane uptake protein.
  
 
 0.796
ebA2473
Hypothetical gene.
  
 
 0.777
tolQ
TOLQ-related transport transmembrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.753
ebA4013
Putative TONB-dependent receptor.
 
 
 
 0.740
exbB2
MotA/TolQ/ExbB proton channel family protein.
  
 
 0.739
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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