Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA1846Similar to periplsmic HlyD type membrane fusion proteins; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (447 aa)    
Predicted Functional Partners:
macB
Transmembrane ATP-binding ABC transporter protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.992
ebA1847
Probable outer membrane protein.
 
 
 0.936
ebA4059
Putative ABC transporter protein.
 
 
 0.862
ebA4058
Putative ABC transporter protein.
 
 
 0.857
tolC
Type I secretion outer membrane efflux protein.
 
 0.812
acrB
Acriflavine resistance protein B.
 
 
 0.745
acrA-2
AcrA/AcrE family putative membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.725
ebA1783
Outer membrane protein, ortholog involved in agglutination in some bacteria.
  
 0.705
ebA4061
Putative ABC transporter protein,ATPase component.
 
 
 0.703
ebA7101
Cation/multidrug efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.693
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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