Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA1855Hypothetical protein. (169 aa)    
Predicted Functional Partners:
ebA1853
Hypothetical protein.
       0.664
ebD42
Hypothetical protein.
       0.664
ebA1852
Hypothetical protein.
       0.634
ftsQ
Cell division transmembrane protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
   
 
 0.597
ebA2288
Hypothetical protein.
   
 
 0.574
ebA4929
Hypothetical protein.
   
 
 0.574
ebA6152
Conserved hypothetical protein.
   
 
 0.574
ebA651
Hypothetical protein.
   
 
 0.574
ebA6574
Conserved hypothetical protein.
   
 
 0.574
rec2
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.529
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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