STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1861Similar to uncharacterized protein probably involved in high-affinity Fe2+ transport. (181 aa)    
Predicted Functional Partners:
ebA1866
High-affinity iron permease.
 
  
 0.978
ebA1869
Putative regulatory protein.
 
  
 0.931
ebD44
Conserved hypothetical protein.
 
     0.915
ebA1863
Hypothetical protein.
 
     0.862
ebA4918
Putative iron binding protein component of ABC iron transporter.
   
  
 0.841
macB
Transmembrane ATP-binding ABC transporter protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
    0.580
trxB
Thioredoxin reductase.
   
    0.545
trxB-2
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
    0.545
ebA3688
Probable substrate-binding periplasmic (PBP) ABC transporter protein.
  
  
 0.521
lolD
Probable ATP-binding component, ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
    0.517
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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