STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnp19Transposase. (399 aa)    
Predicted Functional Partners:
int-4
Integrase/recombinase; Belongs to the 'phage' integrase family.
     0.940
ebA1941
Hypothetical protein.
       0.564
ebA1944
Hypothetical protein.
       0.510
gltK
Putative ABC transporter protein,probable glutamate/aspartate transmembrane subunit.
  
 
 0.497
gltJ
Putative ABC transporter protein,probable glutamate/aspartate transmembrane subunit.
  
 
 0.497
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
   
 
 0.492
gltL
ABC transporter protein, ATP-binding component.
  
 
 0.491
int-12
Phage-related integrase.
 
     0.491
ebA5014
Similar to phosphate import ATP-binding protein pstB 1; Belongs to the ABC transporter superfamily.
  
 
 0.491
gls1
Ferredoxin-dependent glutamate synthase.
  
  
 0.445
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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