STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
int-5Phage-related integrase; Belongs to the 'phage' integrase family. (347 aa)    
Predicted Functional Partners:
int-16
Phage-related integrase; Belongs to the 'phage' integrase family.
  
     0.774
int-12
Phage-related integrase.
  
     0.773
int-15
Phage-related integrase.
  
     0.772
tnpF-4
Transposase, fragment.
 
     0.659
tnp20
Putative transposase, fragment.
       0.615
int-20
Integrase or site-specific recombinase.
  
     0.482
tnpF6
Transposase, fragment.
       0.433
ebD46
Hypothetical protein, possibly transposase, fragment.
       0.433
ebA1065
Conserved hypothetical protein,predicted phosphoribosyltransferase family.
   
    0.418
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.