STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
badJCyclohexanecarboxyl-CoA dehydrogenase. (382 aa)    
Predicted Functional Partners:
aliA
Cyclohexanecarboxylate-CoA ligase.
 
 
 0.942
badK
Cyclohex-1-ene-1-carboxyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.937
etfA
Electron transfer flavoprotein alpha subunit.
 
 0.879
etfB
Electron transfer flavoprotein, beta-subunit.
 
 
 0.772
fadB
Alpha-subunit of fatty acid oxidation complex.
  
 0.771
ebA2038
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 0.771
ebA2315
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 0.771
ebA5620
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.542
hbdA
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.513
c2A173
3-Hydroxyacyl-CoA dehydrogenase.
 
 
 0.509
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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