STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompCOuter membrane protein (porin), similar to outer membrane porin protein 32 precursor (OMP32). (346 aa)    
Predicted Functional Partners:
aliA
Cyclohexanecarboxylate-CoA ligase.
  
    0.656
badK
Cyclohex-1-ene-1-carboxyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.655
ebA1863
Hypothetical protein.
  
  
 0.628
ebA3180
Hypothetical protein.
  
     0.577
ebA2143
Putative porin precursor transmembrane protein.
  
  
 
0.569
ompC-3
Outer membrane protein (porin).
  
  
 
0.562
ebA5644
Outer membrane porin protein, similar to precursor (OMP32).
  
  
 
0.562
ompC-2
Outer membrane protein (porin).
  
  
 
0.561
ebA126
Two-component sensor kinase.
  
   0.557
ebA7156
Conserved hypothetical protein.
  
     0.548
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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