STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1969Transcriptional regulator, TetR family. (204 aa)    
Predicted Functional Partners:
acrA
Acriflavin resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.655
acrB
Acriflavine resistance protein B.
 
   
 0.615
opmR
Outer membrane protein oprM precursor.
 
   
 0.584
ebA2046
Probable TetR-family transcriptional regulator.
  
     0.554
ebA1048
Hypothetical protein.
  
     0.520
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
 
    0.496
ebA1965
Conserved hypothetical protein.
   
 
 0.445
ebA5314
TetR-family transcriptional regulator.
  
     0.411
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
 
   
 0.409
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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