STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase. (298 aa)    
Predicted Functional Partners:
trxB-2
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.926
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.912
metC
Cystathionine beta-lyase, putative (EC 4.4.1.8), gene: metC.
   
 
 0.911
ebA6367
Putative aminotransferase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.910
ahpC
Predicted peroxiredoxin.
  
 
 0.891
trxC
Putative thioredoxin.
 
 
 0.761
trxA
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.754
ascD
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehyd rase reductase.
   
 
 0.690
katA
Catalase; Belongs to the catalase family.
   
 
 0.645
paaE
Probable ring-hydroxylation complex protein 4.
   
 
 0.588
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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