Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA2016Predicted signal transduction protein. (241 aa)    
Predicted Functional Partners:
ebA2017
Hypothetical protein.
       0.762
motA
Chemotaxis motA protein.
 
     0.681
flhA
Flagellar biosynthesis protein flha.
 
     0.667
flhB
Flagellar biosynthetic protein flhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 
     0.656
flgL
Flagellin and related hook-associated protein.
 
   
 0.650
ebA6328
Complex sensory protein with histidine kinase domain.
 
  
 0.627
ebA5582
Conserved hypothetical protein,predicted Rhodopsin-like GPCR superfamily.
 
   
 0.609
ebA6216
Probable membrane-associated methyl-accepting chemotaxis protein with HAMP domain.
 
     0.537
ebA2985
Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL).
 
   
 0.526
ebA2018
Hypothetical protein.
       0.517
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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