Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
araC | ebA2026 | ebA3764 | ebA2026 | Transcriptional regulator, AraC family. | Putative regulatory protein, LuxR. | 0.547 |
araC | ebD85 | ebA3764 | ebD85 | Transcriptional regulator, AraC family. | Conserved hypothetical protein. | 0.464 |
ebA2026 | araC | ebA2026 | ebA3764 | Putative regulatory protein, LuxR. | Transcriptional regulator, AraC family. | 0.547 |
ebA2026 | ebA2032 | ebA2026 | ebA2032 | Putative regulatory protein, LuxR. | INTERPRO: probable Peptidase, eukaryotic cysteine peptidase active site. | 0.589 |
ebA2026 | ebA2036 | ebA2026 | ebA2036 | Putative regulatory protein, LuxR. | Putative thioesterase. | 0.510 |
ebA2026 | ebA3362 | ebA2026 | ebA3362 | Putative regulatory protein, LuxR. | Hypothetical protein. | 0.519 |
ebA2026 | ebA3729 | ebA2026 | ebA3729 | Putative regulatory protein, LuxR. | Putative two-component sensor protein. | 0.482 |
ebA2026 | ebA3935 | ebA2026 | ebA3935 | Putative regulatory protein, LuxR. | Hypothetical protein. | 0.453 |
ebA2026 | ebA5167 | ebA2026 | ebA5167 | Putative regulatory protein, LuxR. | Conserved hypothetical protein. | 0.456 |
ebA2026 | ebA6051 | ebA2026 | ebA6051 | Putative regulatory protein, LuxR. | Putative sensory transduction histidine kinase of highly complex domain structure. | 0.486 |
ebA2026 | ebD49 | ebA2026 | ebD49 | Putative regulatory protein, LuxR. | Hypothetical protein. | 0.589 |
ebA2026 | ebD85 | ebA2026 | ebD85 | Putative regulatory protein, LuxR. | Conserved hypothetical protein. | 0.501 |
ebA2032 | ebA2026 | ebA2032 | ebA2026 | INTERPRO: probable Peptidase, eukaryotic cysteine peptidase active site. | Putative regulatory protein, LuxR. | 0.589 |
ebA2032 | ebA2036 | ebA2032 | ebA2036 | INTERPRO: probable Peptidase, eukaryotic cysteine peptidase active site. | Putative thioesterase. | 0.672 |
ebA2032 | ebD49 | ebA2032 | ebD49 | INTERPRO: probable Peptidase, eukaryotic cysteine peptidase active site. | Hypothetical protein. | 0.783 |
ebA2036 | ebA2026 | ebA2036 | ebA2026 | Putative thioesterase. | Putative regulatory protein, LuxR. | 0.510 |
ebA2036 | ebA2032 | ebA2036 | ebA2032 | Putative thioesterase. | INTERPRO: probable Peptidase, eukaryotic cysteine peptidase active site. | 0.672 |
ebA2036 | ebD49 | ebA2036 | ebD49 | Putative thioesterase. | Hypothetical protein. | 0.672 |
ebA3362 | ebA2026 | ebA3362 | ebA2026 | Hypothetical protein. | Putative regulatory protein, LuxR. | 0.519 |
ebA3362 | ebA5167 | ebA3362 | ebA5167 | Hypothetical protein. | Conserved hypothetical protein. | 0.448 |
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