STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ebA2047Transcriptional regulator, GntR family. (229 aa)    
Predicted Functional Partners:
ebA2049
Putative beta-oxoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
     0.599
ebA4048
Putative transcription regulator protein, IclR family.
  
  
 0.573
ilvN
Acetolactate synthase isozyme I small subunit.
  
    0.529
ilvH
Probable acetolactate synthase isozyme III (Small subunit) protein.
   
    0.493
ebA2046
Probable TetR-family transcriptional regulator.
     
 0.472
ebA2038
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
 
  
 0.459
hyuB
Hydantoin utilization protein B.
 
     0.459
hyuA
Hydantoin utilization protein A.
 
     0.452
ebA4487
Regulatory protein, GntR.
 
  
0.426
ebA2064
Large subunit of molybdenum enzyme.
 
    0.420
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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