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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hyuAHydantoin utilization protein A. (707 aa)    
Predicted Functional Partners:
hyuB
Hydantoin utilization protein B.
 0.999
acxB
Acetone carboxylase alpha subunit.
 
 0.876
acxC
Acetone carboxylase gamma subunit.
 
 
 
 0.796
fcs
Putative ADP-producing CoA ligase,similar to feruloyl-CoA synthetase.
       0.783
ebA2055
Putative acyl-CoA dehydrogenase.
       0.783
sbmA
Methylmalonyl-CoA mutase subunit alpha.
       0.783
SbmB
Methylmalonyl-CoA mutase, C-terminal domain/subunit (Cobalamin-binding).
       0.783
ebD51
Hypothetical protein, potential small subunit of hyantoinase/(de)carboxylase.
       0.773
ebA2062
Medium FAD-binding subunit of molybdenum enzyme.
       0.767
ebA2063
Small Fe/S-containing subunit of molybdenum enzyme.
       0.762
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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