STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA2070Branched-chain amino acid ABC transporter. (382 aa)    
Predicted Functional Partners:
ebA3559
Putative branched-chain amino acid transport system protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.949
ebA3558
Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.865
ebA2706
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.753
ebA3560
Amino-acid composite ATP-binding transmembrane ABC transporter protein.
 
  
 0.739
ebA3170
Putative ABC transport protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.725
ebA5306
Putative ABC-transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.723
ebA5304
Putative ABC-transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.682
livM
Predicted branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.651
ebA2755
ABC-transporter.
  
     0.644
livG
Leucine/isoleucine/valine transport system ATP-binding protein.
 
  
 0.629
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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