Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA2079Conserved hypothetical protein,predicted NnrS family. (413 aa)    
Predicted Functional Partners:
ebA5142
Conserved hypothetical protein, putativ NnrS family.
  
     0.625
nosR
NosR transcription regulator (N-terminal domain), contains 4Fe-4S cluster.
 
    0.516
norB
Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.509
nosL
Putative lipoprotein.
 
     0.506
ebA2078
Conserved hypothetical protein.
       0.489
nosZ
Nitrous-oxide reductase.
 
  
 0.453
nosY
Probable transmembrane protein.
 
    0.442
norC
Nitric-oxide reductase subunit C.
 
    0.437
nosD
Putative copper binding periplasmic protein.
 
    0.432
ebA188
Predicted nitric oxide reductase activation protein.
 
  
 0.428
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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