Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ebA2112Conserved hypothetical protein, similar to NnrS (Uncharacterized protein involved in response to NO). (416 aa)    
Predicted Functional Partners:
ebA2115
Putative periplasmic component of ABC-type transport system.
 
    0.915
ebA2114
Putative ABC transporter, permease protein.
 
     0.875
hemR
Hemin receptor precursor, TonB-dependent outer membrane uptake protein.
 
     0.850
ebA2113
ATPase component ABC-type transport system.
 
    0.816
nosR
NosR transcription regulator (N-terminal domain), contains 4Fe-4S cluster.
 
    0.593
nosL
Putative lipoprotein.
 
     0.589
nosY
Probable transmembrane protein.
 
    0.524
nosD
Putative copper binding periplasmic protein.
 
    0.509
nosZ
Nitrous-oxide reductase.
 
  
 0.502
ebA2119
Hypothetical protein.
       0.460
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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