STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2114Putative ABC transporter, permease protein. (265 aa)    
Predicted Functional Partners:
ebA2113
ATPase component ABC-type transport system.
  
 0.990
ebA2115
Putative periplasmic component of ABC-type transport system.
 
  
 0.983
ebA2112
Conserved hypothetical protein, similar to NnrS (Uncharacterized protein involved in response to NO).
 
     0.876
hemR
Hemin receptor precursor, TonB-dependent outer membrane uptake protein.
 
   
 0.830
ebA2989
Similar to ABC transporter.
  
  
 0.694
ebA6324
Predicted substrate-binding protein involved in ABC-type nitrate/sulfonate/bicarbonate transport system.
  
  
 0.694
tauA
Predicted ABC-type nitrate/sulfonate/bicarbonate transport system protein.
  
  
 0.694
ebA2111
Putative iron transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
      0.464
ebA2119
Hypothetical protein.
       0.460
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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