STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA2115Putative periplasmic component of ABC-type transport system. (337 aa)    
Predicted Functional Partners:
ebA2114
Putative ABC transporter, permease protein.
 
 
 0.992
ebA2113
ATPase component ABC-type transport system.
 
 
 0.978
ebA2112
Conserved hypothetical protein, similar to NnrS (Uncharacterized protein involved in response to NO).
 
    0.915
hemR
Hemin receptor precursor, TonB-dependent outer membrane uptake protein.
 
   
 0.832
ebA6073
Conserved hypothetical protein.
 
    0.526
nosR
NosR transcription regulator (N-terminal domain), contains 4Fe-4S cluster.
  
    0.515
ebA2119
Hypothetical protein.
       0.460
ebA2111
Putative iron transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
     
 0.455
glnB
P2-like signal transmitter protein GlnB; Belongs to the P(II) protein family.
   
 
 0.443
glnK
P2-like signal transmitter protein GlnK; Belongs to the P(II) protein family.
   
 
 0.443
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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