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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2143Putative porin precursor transmembrane protein. (349 aa)    
Predicted Functional Partners:
ebA1522
Conserved hypothetical protein.
  
     0.717
ebA1863
Hypothetical protein.
  
  
 0.705
ebA1504
Conserved hypothetical protein,predicted archaeal ATPase family.
  
     0.632
ebA6713
Conserved hypothetical protein.
  
     0.620
ebA3180
Hypothetical protein.
  
     0.618
ebA1507
Hypothetical protein.
  
     0.582
ompC
Outer membrane protein (porin), similar to outer membrane porin protein 32 precursor (OMP32).
  
  
 
0.569
ebA5644
Outer membrane porin protein, similar to precursor (OMP32).
  
  
 
0.569
priB
Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
  
    0.566
ompC-3
Outer membrane protein (porin).
  
  
 
0.563
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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