STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2180Haloacid dehalogenase/epoxide hydrolase family protein. (785 aa)    
Predicted Functional Partners:
copZ
Predicted copper chaperone.
 
 
 0.880
ebA2182
Predicted protein-S-isoprenylcysteine methyltransferase.
     0.873
ebB64
Hypothetical protein.
 
     0.840
ebA2168
Cation efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.700
ebA2183
Putative response regulator.
       0.643
nirD
Assimilatory nitrite reductase, small subunit.
   
 
 0.632
cusA
Cation efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.603
ascD
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehyd rase reductase.
  
  
 0.541
macB
Transmembrane ATP-binding ABC transporter protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.494
ebA2185
Hypothetical protein.
       0.491
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.