Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ebA2229ABC transporter, transmembrane region. (575 aa)    
Predicted Functional Partners:
qhpB
Quinohemoprotein amine dehydrogenase, subunit beta.
 
     0.933
qhpC-2
Quinohemoprotein amine dehydrogenase gamma subunit (EC 1.4.99.-).
 
     0.893
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.891
qhpA
Quinohemoprotein amine dehydrogenase, 60 kDa subunit.
 
    0.880
qhpX
Quinohemoprotein amine dehydrogenase, putative SAM-radical dependentactivating subunit.
 
     0.865
ebA2217
Hypothetical protein.
 
   
 0.826
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 
 0.686
qhpC
Quinohemoprotein amine dehydrogenase gamma subunit.
 
     0.664
ccmF
Cytochrome c-type biogenesis protein CcmF.
 
   
 0.651
ebA1666
Probable fusion of ABC transporter-type transmembrane and ATP binding protein.
  
 
 0.647
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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