Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ebA2241Conserved hypothetical protein,predicted peptidase U32 family. (337 aa)    
Predicted Functional Partners:
ebA2239
Hypothetical protein.
 
     0.899
ebA3592
Conserved hypothetical protein,predicted peptidase U32 falily.
 
 
 0.803
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
   0.781
cycA
Di-heme cytochrome c (class I), probably related to cytochrome c oxidase function.
   
   0.559
ebA3590
Conserved hypothetical protein.
 
  
 0.532
dhaL
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.531
nuoC
NADH dehydrogenase I, chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
   0.406
nosR
NosR transcription regulator (N-terminal domain), contains 4Fe-4S cluster.
  
    0.404
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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