STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gls1Ferredoxin-dependent glutamate synthase. (1561 aa)    
Predicted Functional Partners:
gltD
Glutamate synthase, small subunit.
 0.999
korC
2-ketoglutarate: NADP oxidoreductase gamma subunit.
 
 0.998
bzdV
Uncharacterized protein; Subunit of oxidoreductase of unknown function, conserved in Azoarcus-type benzoate degradation gene clusters.
 
 0.996
gdhA
Glutamate/leucine/phenylalanine/valine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.995
fadH
2,4-dienoyl-CoA reductase.
  
 
 0.994
glnA
Glutamine synthetase protein.
  
 
 0.987
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.973
glmS
Glutamine amidotransferase class-II; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.964
purF
Glutamine amidotransferase class-II:phosphoribosyl transferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.955
gdh
NAD-glutamate dehydrogenase.
     
 0.942
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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