Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pilQFimbrial type-IV assembly protein PilQ. (721 aa)    
Predicted Functional Partners:
pilP
Type IV fimbrial biogenesis protein PilP.
 
 
 0.994
pilN
Type IV fimbrial biogenesis protein PilN.
 
 
 0.994
pilM
Type IV fimbrial biogenesis protein PilM.
 
 
 0.989
pilO
Fimbrial type-IV assembly protein PilO.
 
 
 0.984
ebA2958
Conserved hypothetical protein.
 
 
 
 0.949
pilF
Type IV fimbrial biogenesis protein.
  
   
 0.770
pilZ
Type IV fimbrial biogenesis protein PilZ.
  
   
 0.762
pilC
Type IV fimbrial biogenesis protein,PilC.
 
 
 
 0.744
pilU
Twitching mobility protein PilU,transport fimbria.
  
  
 0.733
ebA3069
Conserved hypothetical protein, probably involved in cell wall turnover.
   
 
 0.714
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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