Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
pilPType IV fimbrial biogenesis protein PilP. (171 aa)    
Predicted Functional Partners:
pilQ
Fimbrial type-IV assembly protein PilQ.
 
 
 0.994
pilN
Type IV fimbrial biogenesis protein PilN.
 
  
 0.992
pilO
Fimbrial type-IV assembly protein PilO.
 
  
 0.990
pilM
Type IV fimbrial biogenesis protein PilM.
 
  
 0.973
ebA1239
General (Type II) secretion pathway (GSP) D protein.
  
 
 0.868
pilZ
Type IV fimbrial biogenesis protein PilZ.
  
   
 0.802
fimU
Fimbrial protein pilin similar to FimU.
  
  
 0.790
pilF
Type IV fimbrial biogenesis protein.
  
   
 0.787
ebA4764
Similar to Tfp pilus assembly protein FimV.
  
  
 0.778
ebA2958
Conserved hypothetical protein.
 
     0.776
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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