Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA2288Hypothetical protein. (751 aa)    
Predicted Functional Partners:
hemR
Hemin receptor precursor, TonB-dependent outer membrane uptake protein.
    
 
 0.679
ebA1795
Hypothetical protein.
  
 
 0.603
ebA1050
Carboxy-terminal processing protease; Belongs to the peptidase S41A family.
  
 
 0.581
ebA1855
Hypothetical protein.
   
 
 0.574
ftsK
Cell division FtsK transmembrane protein.
   
 
 0.574
ebA6575
Conserved hypothetical protein.
   
   0.568
ebA2146
Probable regulator protein containing CheR-and CheB-like domains.
   
 
 0.567
ebD59
Conserved hypothetical protein.
       0.520
ebD60
Fragment if conserved hypothetical protein.
       0.520
ebA3244
Conserved hypothetical protein.
    
   0.516
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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