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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2402DNA repair protein similar to radC-family; Belongs to the UPF0758 family. (164 aa)    
Predicted Functional Partners:
ebA1065
Conserved hypothetical protein,predicted phosphoribosyltransferase family.
 
    0.655
mreC
Putative rod shape-determining MreC transmembrane protein; Involved in formation and maintenance of cell shape.
  
  
 0.609
ebA2397
Conserved hypothetical protein.
 
    0.562
ebA2406
Conserved hypothetical protein.
 
   
 0.552
ebA2398
Conserved hypothetical protein.
 
     0.551
ebA2409
Conserved hypothetical protein.
 
     0.547
ebB70
Conserved hypothetical protein.
 
     0.546
ebA2408
Conserved hypothetical protein.
 
     0.545
ebA2407
Conserved hypothetical protein.
 
     0.544
ebA3966
Nucleotide-binding protein implicated in inhibition of septum formation; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.544
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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