STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
intFPhage-related integrase, fragmentary gene. (299 aa)    
Predicted Functional Partners:
int-7
Phage-related integrase; Belongs to the 'phage' integrase family.
   
 0.886
ebD61
Putative transcriptional regulator,possibly phage-related.
 
  
 0.728
reg2
Regulatory protein, LysR-family.
  
     0.640
int-2
Similar to phage-related integrase; Belongs to the 'phage' integrase family.
 
   
 0.564
lysR-3
Transcriptional regulator.
  
     0.552
ebB70
Conserved hypothetical protein.
  
     0.531
ebA2406
Conserved hypothetical protein.
 
     0.524
ebA2408
Conserved hypothetical protein.
  
     0.516
ebA2388
Conserved hypothetical protein.
 
   
 0.514
ebA2465
Conserved hypothetical protein.
  
     0.514
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.