STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysR-3Transcriptional regulator. (208 aa)    
Predicted Functional Partners:
ebA2491
Conserved hypothetical protein.
 
   
 0.894
ebA2465
Conserved hypothetical protein.
  
     0.767
ebB77
Similar to single-stranded DNA binding protein.
 
     0.763
ebA2466
Conserved hypothetical protein.
  
     0.760
ebB70
Conserved hypothetical protein.
  
     0.760
ebA2510
Conserved hypothetical protein.
  
     0.759
ebA2467
Conserved hypothetical protein.
  
   
 0.757
ebA2508
Conserved hypothetical protein.
  
     0.757
ebA2412
Hypothetical protein.
  
     0.756
ebA2395
Conserved hypothetical protein.
  
     0.755
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.