Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ebA2531Conserved hypothetical protein. (278 aa)    
Predicted Functional Partners:
ebA2528
Probable dehydrogenase.
       0.773
bbsB
Subunit of benzoylsuccinyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
     0.482
ebA715
TetR-family transcriptional regulator.
  
     0.470
ebA741
Predicted acetyltransferase.
  
     0.458
bssE
Chaperone.
 
  
 0.456
vapI
Putative plasmid maintenance system antidote protein VapI-containing a helix-turn-helix motif.
       0.452
ORF3
Putative regulatory protein,conserved in anaerobic benzoate degadation gene clusters.
  
     0.415
bbsA
Subunit of benzoylsuccinyl-CoA thiolase.
  
     0.414
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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