Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| boxA | cytC6 | ebA2766 | ebA1004 | Benzoyl-CoA oxygenase component A. | Probable di-heme cytochrome c. | 0.443 |
| boxA | napD | ebA2766 | ebA2558 | Benzoyl-CoA oxygenase component A. | Chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. | 0.850 |
| boxA | padB | ebA2766 | ebA5393 | Benzoyl-CoA oxygenase component A. | Phenylacetyl-CoA:acceptor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.468 |
| cytC6 | boxA | ebA1004 | ebA2766 | Probable di-heme cytochrome c. | Benzoyl-CoA oxygenase component A. | 0.443 |
| cytC6 | ebA1017 | ebA1004 | ebA1017 | Probable di-heme cytochrome c. | Molybdenum enzyme of unknown function,large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.690 |
| cytC6 | ebA3328 | ebA1004 | ebA3328 | Probable di-heme cytochrome c. | Putative cytoplasmic molybdenum cofactor containing oxidoreductase,DMSO reductase family,RSc2859, gene: RSC2859 OR RS00246; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.559 |
| cytC6 | ebA6426 | ebA1004 | ebA6426 | Probable di-heme cytochrome c. | Molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.559 |
| cytC6 | ebA6747 | ebA1004 | ebA6747 | Probable di-heme cytochrome c. | Putative cytoplasmic molybdenum cofactor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.559 |
| cytC6 | napD | ebA1004 | ebA2558 | Probable di-heme cytochrome c. | Chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. | 0.517 |
| cytC6 | padB | ebA1004 | ebA5393 | Probable di-heme cytochrome c. | Phenylacetyl-CoA:acceptor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.884 |
| cytC6 | padB2 | ebA1004 | ebA5622 | Probable di-heme cytochrome c. | Molybdenum enzyme, large subunit,related to phenylacetyl-CoA: acceptor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.559 |
| cytC6 | ttrA | ebA1004 | ebD4 | Probable di-heme cytochrome c. | Putative tetrathionate reductase, subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.626 |
| ebA1017 | cytC6 | ebA1017 | ebA1004 | Molybdenum enzyme of unknown function,large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Probable di-heme cytochrome c. | 0.690 |
| ebA1017 | napD | ebA1017 | ebA2558 | Molybdenum enzyme of unknown function,large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. | 0.701 |
| ebA1017 | ttrA | ebA1017 | ebD4 | Molybdenum enzyme of unknown function,large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative tetrathionate reductase, subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.917 |
| ebA3328 | cytC6 | ebA3328 | ebA1004 | Putative cytoplasmic molybdenum cofactor containing oxidoreductase,DMSO reductase family,RSc2859, gene: RSC2859 OR RS00246; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Probable di-heme cytochrome c. | 0.559 |
| ebA3328 | napD | ebA3328 | ebA2558 | Putative cytoplasmic molybdenum cofactor containing oxidoreductase,DMSO reductase family,RSc2859, gene: RSC2859 OR RS00246; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. | 0.701 |
| ebA6426 | cytC6 | ebA6426 | ebA1004 | Molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Probable di-heme cytochrome c. | 0.559 |
| ebA6426 | napD | ebA6426 | ebA2558 | Molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. | 0.701 |
| ebA6747 | cytC6 | ebA6747 | ebA1004 | Putative cytoplasmic molybdenum cofactor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Probable di-heme cytochrome c. | 0.559 |
page 1 of 2