STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdSRestriction modification system specificity subunit. (424 aa)    
Predicted Functional Partners:
hsdM
Type I site-specific deoxyribonuclease,methylase subunit.
 
 
 0.998
hsdR
Type I restriction-modification system endonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.989
ebA2608
DNA-binding protein.
 
    0.969
prrC
Anticodon nuclease.
 
   
 0.955
ebA3754
Putative death-on-curing family protein.
 
    0.801
ebA675
Conserved hypothetical protein, potential type III restriction enzyme.
  
  
 0.780
ebA6581
Conserved hypothetical protein.
  
  
 0.725
ebA5917
Conserved hypothetical protein.
  
  
 0.722
ebA5924
Hypothetical protein.
  
    0.652
ebA5855
Probable ATP-dependent DNA helicase.
 
    0.647
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.