STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2633Putative stomatin-like transmembrane protein. (264 aa)    
Predicted Functional Partners:
nfeD
Putative nodulation efficiency protein D.
 
  
 0.972
hflB
Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.814
ftsH
Cell division protein ftsH homolog; Belongs to the AAA ATPase family.
   
 0.814
ebA2631
Hypothetical protein.
       0.572
fpr
Ferredoxin-NADP+ reductase.
     
 0.539
ebA6352
Endonuclease.
   
 0.509
ebA1395
Putative zinc protease.
  
 0.497
ebA1394
Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family.
  
 0.483
ebA1753
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
    0.476
ebA3974
Putative transmembrane protein.
   
 0.456
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.