| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cho | dnaN | ebA3500 | ebA2847 | Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein). | DNA polymerase III (Beta chain); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.749 |
| cho | ebA2737 | ebA3500 | ebA2737 | Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein). | Hypothetical protein. | 0.707 |
| cho | recA | ebA3500 | ebA3396 | Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein). | RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.536 |
| cho | recQ | ebA3500 | ebA4224 | Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein). | ATP-dependent DNA helicase protein. | 0.414 |
| cho | uvrB | ebA3500 | ebA5438 | Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein). | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.912 |
| cho-2 | dnaN | ebA4628 | ebA2847 | Excinuclease Cho, similar to DNA polymerase III epsilon subunit family. | DNA polymerase III (Beta chain); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.749 |
| cho-2 | ebA2737 | ebA4628 | ebA2737 | Excinuclease Cho, similar to DNA polymerase III epsilon subunit family. | Hypothetical protein. | 0.657 |
| cho-2 | recA | ebA4628 | ebA3396 | Excinuclease Cho, similar to DNA polymerase III epsilon subunit family. | RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.536 |
| cho-2 | recQ | ebA4628 | ebA4224 | Excinuclease Cho, similar to DNA polymerase III epsilon subunit family. | ATP-dependent DNA helicase protein. | 0.414 |
| cho-2 | uvrB | ebA4628 | ebA5438 | Excinuclease Cho, similar to DNA polymerase III epsilon subunit family. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.922 |
| dnaN | cho | ebA2847 | ebA3500 | DNA polymerase III (Beta chain); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein). | 0.749 |
| dnaN | cho-2 | ebA2847 | ebA4628 | DNA polymerase III (Beta chain); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Excinuclease Cho, similar to DNA polymerase III epsilon subunit family. | 0.749 |
| dnaN | ebA2737 | ebA2847 | ebA2737 | DNA polymerase III (Beta chain); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.611 |
| dnaN | recA | ebA2847 | ebA3396 | DNA polymerase III (Beta chain); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.886 |
| dnaN | recQ | ebA2847 | ebA4224 | DNA polymerase III (Beta chain); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase protein. | 0.776 |
| ebA2737 | cho | ebA2737 | ebA3500 | Hypothetical protein. | Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein). | 0.707 |
| ebA2737 | cho-2 | ebA2737 | ebA4628 | Hypothetical protein. | Excinuclease Cho, similar to DNA polymerase III epsilon subunit family. | 0.657 |
| ebA2737 | dnaN | ebA2737 | ebA2847 | Hypothetical protein. | DNA polymerase III (Beta chain); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.611 |
| ebA2737 | ebA3626 | ebA2737 | ebA3626 | Hypothetical protein. | Hypothetical protein. | 0.635 |
| ebA2737 | ebA5327 | ebA2737 | ebA5327 | Hypothetical protein. | Hypothetical protein; INTERPRO prediction: regulator of chromosome condensation. | 0.619 |