STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkGTrk-type K+ transport system, membrane component. (444 aa)    
Predicted Functional Partners:
trkA
Potassium uptake protein, TrkA family.
 
 
 0.979
ebA5556
Putative potassium uptake protein, TrkA family.
 
 
 0.913
trkA-2
Potassium uptake system NAD-binding component.
  
 
 0.626
ebA5259
Putative KTN NAD-binding domain involved with K+ transport precursor.
  
 
 0.626
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
     
 0.538
cheB
Protein-glutamate methylesterase; Chemotaxis response regulator containing a CheY-like receiver domain and a protein-glutamate methylesterase.
      
 0.509
kefB
Glutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.484
korA
2-ketoglutarate: NADP oxidoreductase,alpha subunit.
   
 
 0.472
korB
2-ketoglutarate: NADP oxidoreductase, beta subunit.
    
 
 0.416
ostA
Organic solvent tolerance transmembrane protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Belongs to the LptD family.
      
 0.412
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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