STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2753Lactonase. (257 aa)    
Predicted Functional Partners:
boxC
Benzoyl-CoA-dihydrodiol lyase; Enoyl-CoA-hydratase/isomerase involved in isomerisation and hydrolytic ring opening of 2,3-dihydro-2,3-diol intermediate of benzoyl-CoA.
 
 
 0.882
ebA2752
Putative thioesterase.
 
   
 0.851
boxR
Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
  
 0.817
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
     
 0.777
fdhA
Formate dehydrogenase alpha subunit,molybdenum or tungsten enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.773
ebA2751
Hypothetical protein.
       0.773
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 
 0.771
bclA
Benzoate-CoA ligase.
 
   
 0.765
boxB
Benzoyl-CoA oxygenase component B.
 
    0.759
boxA
Benzoyl-CoA oxygenase component A.
 
   
 0.735
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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