STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA27683-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)    
Predicted Functional Partners:
ebA2315
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
 
 0.939
ebA2038
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 0.931
fadB
Alpha-subunit of fatty acid oxidation complex.
 
 0.930
boxC
Benzoyl-CoA-dihydrodiol lyase; Enoyl-CoA-hydratase/isomerase involved in isomerisation and hydrolytic ring opening of 2,3-dihydro-2,3-diol intermediate of benzoyl-CoA.
  
 0.691
boxA
Benzoyl-CoA oxygenase component A.
     
 0.688
boxR
Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
     
 0.683
ebB200
Conserved hypothetical protein,probable small subunit of thiolase encoded by ebA5673.
  
 
 0.682
bbsA
Subunit of benzoylsuccinyl-CoA thiolase.
  
 
 0.680
ebA2769
Conserved hypothetical protein,predicted Rhodopsin-like G-protein coupled receptor superfamily.
       0.668
ebA5620
3-hydroxyacyl-CoA dehydrogenase.
 
 0.654
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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