Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
smuGSingle-strand selective monofunctional uracil DNA glycosylase. (244 aa)    
Predicted Functional Partners:
ampG
Muropeptide transporter.
       0.768
can
Carbonic anhydrase, beta family; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.718
ebA2811
Conserved hypothetical protein.
       0.521
ebA6494
Probable glycoprotease.
  
    0.487
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.447
xccA
Putative carboxylase subunit of acetyl-CoA carboxylase-like enzyme.
  
    0.418
xccA-2
Carboxylase subunit of unknown acetyl-CoA carboxylase-like enzyme.
  
    0.418
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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