STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2828Response regulator receiver protein with helix-turn-helix domain. (414 aa)    
Predicted Functional Partners:
ebA2830
Sensory transduction histidine kinase.
 
 
 0.964
ebA2832
Conserved hypothetical protein.
 
     0.910
ebA2146
Probable regulator protein containing CheR-and CheB-like domains.
  
 
 0.754
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.728
ebA5371
Hybrid sensor component of two-component regulation system.
 
 
 
 0.644
trkA-2
Potassium uptake system NAD-binding component.
       0.626
sun
tRNA and rRNA cytosine-C5-methylases sun; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
       0.619
ebA2824
Cation transport protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
       0.608
tdiS
Two-component sensor.
 
 
 
 0.599
ebA639
Conserved hypothetical protein.
  
     0.599
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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