STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2830Sensory transduction histidine kinase. (715 aa)    
Predicted Functional Partners:
ebA2828
Response regulator receiver protein with helix-turn-helix domain.
 
 
 0.964
ebA2832
Conserved hypothetical protein.
 
    0.957
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
   
 
 0.785
flhF
Possible flagellar biosynthetic protein FlhF.
  
  
 0.741
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.677
flhA
Flagellar biosynthesis protein flha.
  
  
 0.635
sun
tRNA and rRNA cytosine-C5-methylases sun; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
       0.632
ebA2824
Cation transport protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
     
 0.626
trkA-2
Potassium uptake system NAD-binding component.
     
 0.620
ebA6328
Complex sensory protein with histidine kinase domain.
  
 
 0.620
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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