STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2878Predicted transcriptional regulator. (153 aa)    
Predicted Functional Partners:
ebA2876
Probable ATP-binding ABC transporter protein.
       0.773
ccoN
Cytochrome C oxidase subunit transmembrane protein (EC 1.9.3.1).
  
  
 0.700
iscS
Cysteine desulfurase involved in Fe-S cluster formation (EC 4.4.1.-); Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
  
  
 0.676
iscS1
Putative cysteine desulfurase involved in Fe-S cluster formation.
  
  
 0.676
ccoO
Cytochrome oxidase, cytochrome c subunit.
  
    0.658
ebA2875
Conserved hypothetical protein; Belongs to the UPF0145 family.
     
 0.637
ebA2887
Hypothetical protein.
 
     0.562
ebA2886
Protein SCO1; Predicted uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
     0.549
cccA
Probable cytochrome c subunit of cbb3 type cytochrome oxidase.
  
  
 0.515
norVW
Fusion protein of nitric oxide reductase (flavorubredoxin NorV) with its associated reductase (NorW).
     
 0.506
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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