STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2887Hypothetical protein. (225 aa)    
Predicted Functional Partners:
ebA2886
Protein SCO1; Predicted uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
   
 0.948
cccA
Probable cytochrome c subunit of cbb3 type cytochrome oxidase.
 
     0.794
ccoN
Cytochrome C oxidase subunit transmembrane protein (EC 1.9.3.1).
 
     0.772
coxA2
Cytochrome c oxidase, subunit I (EC 1.9.3.1).
 
   
 0.764
ebA3668
Electron transport protein SCO1/SenC.
 
   
 0.763
ccoO
Cytochrome oxidase, cytochrome c subunit.
 
     0.740
coxB2
Probable cytochrome-c oxidase subunit II.
 
   
 0.655
ebA2878
Predicted transcriptional regulator.
 
     0.562
ebA4281
Conserved hypothetical protein.
  
     0.549
ebA3117
Similar to transmembrane protein.
  
     0.510
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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