Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ahpC | ebA1809 | ebA4399 | ebA1809 | Predicted peroxiredoxin. | Ferric uptake regulator; Belongs to the Fur family. | 0.657 |
ahpC | fur | ebA4399 | ebB167 | Predicted peroxiredoxin. | Ferric uptake regulation protein (Ferric uptake regulator); Belongs to the Fur family. | 0.791 |
ahpC | norVW | ebA4399 | ebA539 | Predicted peroxiredoxin. | Fusion protein of nitric oxide reductase (flavorubredoxin NorV) with its associated reductase (NorW). | 0.766 |
ahpC | sodB | ebA4399 | ebA5077 | Predicted peroxiredoxin. | Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.654 |
ahpC | tpx | ebA4399 | ebA2918 | Predicted peroxiredoxin. | Probable thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.611 |
ebA1809 | ahpC | ebA1809 | ebA4399 | Ferric uptake regulator; Belongs to the Fur family. | Predicted peroxiredoxin. | 0.657 |
ebA1809 | ebA5688 | ebA1809 | ebA5688 | Ferric uptake regulator; Belongs to the Fur family. | Hypothetical protein. | 0.541 |
ebA1809 | norVW | ebA1809 | ebA539 | Ferric uptake regulator; Belongs to the Fur family. | Fusion protein of nitric oxide reductase (flavorubredoxin NorV) with its associated reductase (NorW). | 0.639 |
ebA1809 | tpx | ebA1809 | ebA2918 | Ferric uptake regulator; Belongs to the Fur family. | Probable thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.455 |
ebA2921 | ebA2924 | ebA2921 | ebA2924 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.800 |
ebA2921 | tpx | ebA2921 | ebA2918 | Conserved hypothetical protein. | Probable thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.496 |
ebA2924 | ebA2921 | ebA2924 | ebA2921 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.800 |
ebA2924 | tpx | ebA2924 | ebA2918 | Conserved hypothetical protein. | Probable thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.502 |
ebA5688 | ebA1809 | ebA5688 | ebA1809 | Hypothetical protein. | Ferric uptake regulator; Belongs to the Fur family. | 0.541 |
ebA5688 | fur | ebA5688 | ebB167 | Hypothetical protein. | Ferric uptake regulation protein (Ferric uptake regulator); Belongs to the Fur family. | 0.541 |
ebA5688 | minE | ebA5688 | ebA6839 | Hypothetical protein. | Cell division topological specificity factor protein minE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.432 |
ebA5688 | tpx | ebA5688 | ebA2918 | Hypothetical protein. | Probable thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.522 |
ebA6908 | minE | ebA6908 | ebA6839 | Conserved hypothetical protein,predicted short-chain dehydrogenase/reductase SDR family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Cell division topological specificity factor protein minE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.438 |
ebA6908 | tpx | ebA6908 | ebA2918 | Conserved hypothetical protein,predicted short-chain dehydrogenase/reductase SDR family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Probable thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.493 |
fur | ahpC | ebB167 | ebA4399 | Ferric uptake regulation protein (Ferric uptake regulator); Belongs to the Fur family. | Predicted peroxiredoxin. | 0.791 |
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