STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA2924Conserved hypothetical protein. (948 aa)    
Predicted Functional Partners:
ebA2921
Conserved hypothetical protein.
       0.804
ebA6328
Complex sensory protein with histidine kinase domain.
 
 
0.786
ebA3785
Phospholipase A2 family protein.
 
 
0.720
ebA6472
Putative response regulator receiver.
 
  
0.691
ebA2147
Conserved hypothetical protein, contains PAS domains.
 
 
0.673
ebA1682
Putative metal-dependent phosphohydrolase, possibly cGMP-dependent 3',5'-cyclic phosphodiesterase (EC 3.1.4.17).
 
   
 0.660
ebA2985
Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL).
 
 
0.653
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
  
 
 0.648
ebA1422
Predicted phospholipase A2.
 
 
 
0.638
ebA6058
Probable response regulator.
 
  
0.578
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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