STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhA-2Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (968 aa)    
Predicted Functional Partners:
fdhC
Putative Formate dehydrogenase subunit C.
 
 
 0.997
fdhB-2
Formate dehydrogenase iron-sulfur subunit.
 
 
 0.996
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
 
 0.992
ebA5004
Iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase.
 
 
 0.955
ebA2940
Putative iron-sulfur binding protein.
 
 
 
 0.948
fdhA
Formate dehydrogenase alpha subunit,molybdenum or tungsten enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 
0.926
hyfG
Subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenases.
  
 
 0.910
ebA2939
Cytoplasmic 'private chaperone' of TorD family, probably for assembly of Mo-cofactor in formate dehydrogenase.
 
   
 0.904
ebA5712
Putative esterase/lipase/thioesterase; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.903
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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