STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA2951Sigma-54 dependent response regulator. (463 aa)    
Predicted Functional Partners:
rpoN2
RNA polymerase sigma N (Sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.774
rpoN1
RNA polymerase sigma N (Sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.773
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein B.
  
    0.756
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
  
 
 0.586
ntrB
Nitrogen assimilation sensor kinase.
 
 
 0.530
ebA2146
Probable regulator protein containing CheR-and CheB-like domains.
  
 
 0.474
ebA6722
Histidine kinase.
 
 
 
 0.474
htpX
Putative protease htpX homolog; Belongs to the peptidase M48B family.
     
 0.469
pilL
Pili chemotaxis protein similar PilL.
  
 
 0.448
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
  
 
 0.427
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.