STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA2980Conserved hypothetical protein. (156 aa)    
Predicted Functional Partners:
ebA5828
Conserved hypothetical protein.
  
     0.745
ebA5598
Hypothetical protein.
  
     0.702
ebA4108
Hypothetical protein.
  
     0.697
ebA6852
Probable phasin.
  
     0.650
ebA1323
Conserved hypothetical protein,predicted phasin family.
  
     0.639
rsuA
Ribosomal small subunit pseudouridine synthase A protein; Belongs to the pseudouridine synthase RsuA family.
 
     0.617
ebA3587
Hypothetical protein.
  
     0.602
phbP-2
Granule-associated protein (PHASIN).
  
     0.594
ebB92
Hypothetical protein.
  
     0.593
rdgC
DNA recombination-dependent growth factor; May be involved in recombination; Belongs to the RdgC family.
       0.578
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.