Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gcdHGlutaryl-CoA dehydrogenase. (395 aa)    
Predicted Functional Partners:
coaT
CoA-transferase; Belongs to the CoA-transferase III family.
 
 0.988
fadB
Alpha-subunit of fatty acid oxidation complex.
  
 0.979
ech
Putative enoyl-CoA hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.947
paaF
Putative enoyl-CoA hydratase protein.
 
  0.947
ebA2314
Putative thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.942
c2A174
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.939
lpd
Pyruvate dehydrogenase multienzyme complex, Dihydrolipoamide dehydrogenase component.
  
 0.930
ebA5641
Acyl-CoA dehydrogenase.
  
  
 
0.922
ebA736
Putative acyl-CoA dehydrogenase.
  
  
 
0.922
ldp
2-oxoglutarate dehydrogenase complex, E3 component, Dihydrolipoamide dehydrogenase.
   
 
 0.917
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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